miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|31463138|gb|CD405166.1|CD405166 GCTAAAAAAGTAGCATTCAAATGATTAATCACACAAATGTGCATATACATCGAAATATAGCGCATTAATTAGTACCATCA
TCTTAATTAATTAAGCTAAATGAGAATAAAGAAAACTAATTAAGCTTGATTTCCATGAATTATGAAGTCTTCAAGGGCTT
GCAAATACTGTCACGGCTAGCTAGCACACATTTTATTCAGGAATAATGAAGTATAGCATCATGAGCAATCAGCCTTAGAT
TTTTTTAGCAGATTGACTGCTCATGATGTTATATCATTTCCATGAATTTACCTCTATGCATGCTACCATATTTATATGTA
TATGCTGCCCCATTTGTAAAAAACTCCTAACGAAAGCCCCCTCCTAGGGCTGGAGCCCAATAATCTGCTCCATTGTCACT
TCCAACTTGCAGTGTGCATGACACTGGCACCAGACACAACCCTCTACTCCTCAGCCCCTTCTTTGGTTCTTCTTGAGTAT
CCGGCTCTCCAGCTGCTTTCCTCTTCAAGCAGTTTTCATCCAGCAGCTGACCGGGGTCTTCAGGGAATATACATCTCTTC
TCTCCTTGAACAGAATGTTGCTGCCTCGTGTTCCCTGATCCACCGCTCAAGTATGGTAAGCTAAGAGCCTCAATTTG




Most similar to sp|Q8S3D1|BH068_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis
           thaliana GN=BHLH68 PE=2 SV=2
          Length = 407

 Score =  133 bits (334), Expect = 1e-30
 Identities = 65/98 (66%), Positives = 75/98 (76%), Gaps = 6/98 (6%)
 Frame = -1

Query: 637 QIEALSLPYL-SGGSGNTRQQHSVQGEKRCIFPEDPGQLLDENCLKRKAAGEPDTQ---- 473
           QIEALS PY  +  SGN R Q  +QG++ CIFPEDPGQL+++ C+KR+ A    T     
Sbjct: 305 QIEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNA 364

Query: 472 -EEPKKGLRSRGLCLVPVSCTLQVGSDNGADYWAPALG 362
            EEPKK LRSRGLCLVP+SCTLQVGSDNGADYWAPALG
Sbjct: 365 SEEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALG 402